FCV seqs

Feline calicivirus (FCV)
Virus	Strain	Region	Length	Accession No.	Reference	Comments
FCV	F9	CG	7690	M86379	Carter et al., 1992a
FCV	F9	pol(p)+complete capsid	4381	Z11536	Carter, 1990; Carter et al., 1992b
FCV	CFI/68 (USA?)	complete capsid	2493	M32819	Neill et al., 1991
		CG	7677	U13992	Neill, unpublished (a)
		2C, pro & pol	3865	M32296	Neill, 1990
FCV	KCD	complete capsid	2390	L09719	Seal et al., 1993
FCV	NADC	complete capsid	2395	L09718	Seal et al., 1993
FCV	F4 (Japan?)	pol(p), complete capsid	3516	D90357	Tohya et al., 1991
FCV	F4 (Japan?)	CG	7681	D31836	Oshikamo et al., 1994
FCV	28043.87	capsid(p)	658	U06645	Seal, 1994
FCV	255	capsid(p)	658	U06646	Seal, 1994
FCV	255	pol(p), complete capsid	2406	U07130	Seal & Neill, 1995
FCV	FRI-NCI	capsid(p)	658	U06647	Seal, 1994
FCV	82857-91	capsid(p)	658	U06648	Seal, 1994
FCV	LLK	capsid(p)	658	U06649	Seal, 1994
FCV	LLK	poly(p), complete capsid	2409	U07131	Seal & Neill, 1995
FCV	FS	capsid(p)	658	U06650	Seal, 1994
FCV	89243-91	capsid(p)	658	U06651	Seal, 1994
FCV	FPL (Bolin)	capsid(p)	658	U06652	Seal, 1994
FCV	FPL-NCI	capsid(p)	658	U06653	Seal, 1994
FCV	Urbana	CG	7683	L40021	Sosnovtsev and Green, 1995
FCV	2280	capsid	2007	X99445	Geissler et al., 1997
FCV	KS109	capsid	2010	X99446	Geissler et al., 1997
FCV	KS-20	capsid	2013	X99447	Geissler et al., 1997
FCV	KS-40	capsid	2016	X99448	Geissler et al., 1997
FCV	KS-8	capsid	2007	X99449	Geissler et al., 1997
FCV	255-P1	capsid(p)	617	U83970	Kreutz et al., 1998	Persistence-variants derived from the 255 strain
FCV	255-P2	capsid(p)	617	U83971	Kreutz et al., 1998
FCV	255-P3	capsid(p)	617	U83972	Kreutz et al., 1998
FCV	255-P4	capsid(p)	617	U83973	Kreutz et al., 1998
FCV	255-P5	capsid(p)	617	U83974	Kreutz et al., 1998
FCV	255-P6	capsid(p)	617	U83975	Kreutz et al., 1998
FCV	255-P7	capsid(p)	617	U83976	Kreutz et al., 1998
FCV	255-P8	capsid(p)	620	U83977	Kreutz et al., 1998
FCV	255-P9	capsid(p)	617	U83978	Kreutz et al., 1998
FCV	V77	capsid	2004	AF038126	Baulch-Brown and Meanger, unpub.
FCV	V3	capsid(p)	630	AF038381	Baulch-Brown and Meanger, unpub.
FCV	V25	capsid(p)	630	AF038382	Baulch-Brown and Meanger, unpub.
FCV	258cvs484	capsid(p)	657	AF038383	Baulch-Brown and Meanger, unpub.
FCV	254cvs465	capsid(p)	621	AF043227	Baulch-Brown and Meanger, unpub.
FCV	182cvs5A	capsid	2010	AF031875	Baulch-Brown and Meanger, unpub
FCV	tiger (Shanghai, China)	capsid region E	518	AY207369	Gao, Y.W. and Xia, X.Z., unpub.
FCV	tiger (Guanxi, China)	capsid region E	518	AY208123	Fan et al., unpub.
FCV	cheetah (Shanghai, China)	capsid region E	518	AY208124	Gao, Y.W. and Xia, X.Z., unpub.
Feline-like caliciviruses isolated from dogs
FCV-like	Sapporo/283	pol(p)	553	AF098932	Hashimoto et al., unpub.
CG = complete genome; (p) = partial gene sequence; N/A = not available on the EMBL/GenBank/DDBJ databases

References

Baulch-Brown, C. and Meanger, J. Unpublished data (CVRU, Macfarlane Burnet Centre for Medical Research, PO Box 254, Fairfield, Victoria 3078, Australia).

Carter, M.J. (1990). Transcription of feline calicivirus RNA. Arch. Virol. 114: 143-152.

Carter, M.J., Milton, I.D., Meanger, J., Turner, P.C., Bennett, M.F. and Gaskell, R.M. (1992a). The complete genome sequence of a feline calicivirus. Virology 190: 443-448.

Carter, M.J., Milton, I.D., Turner, P.C., Meanger, J., Bennett, M. and Gaskell, R.M. (1992b). Identification and sequence determination of the capsid protein gene of feline calicivirus. Arch. Virol. 0: 0-0.

Fan, Q.S., Xia, X.Z. and Gao, Y.W. Characterization and hypervariable region analysis of two feline calicivirus isolates from cheetah and tiger. Unpublished. [Animal Virology, Changchun University of Agriculture and Animal Sciences, No.175 Xi'an Road, Changchun, Jilin 130062, P.R. China]

Gao, Y.W. and Xia, X.Z. Characterization and hypervariable region analysis of two feline calicivirus isolates from cheetah and tiger. Unpublished. [Animal Virology, Changchun University of Agriculture and Animal Sciences, No.175 Xi'an Road, Changchun, Jilin 130062, P.R. China]

Geissler, K., Schneider, K., Platzer, G., Truyen, B., Kaada, O.R. and Truyen, U. (1997). Genetic and antigenic heterogeneity among feline calicivirus isolates from distinct disease manifestations. Virus Res. 48: 193-206.

Hashimoto M., Roerink F., Tohya Y., Mochizuki M. Genomic organization of an FCV-like calicivirus isolated from a dog. Unpublished. [Laboratory of Clinical Microbiology, Kyoritsu Shoji Corporation, 1-12-4 Kudan-Kita, Chiyoda-Ku, Tokyo 102-0073, Japan]

Kreutz, L.C., Johnson, R.P. and Seal, B.S. (1998). Phenotypic and genotypic variation of feline calicivirus during persistent infection of cats. Vet. Microbiol. 59: 229-236.

Neill, J.D. (1990). Nucleotide sequence of a region of the feline calicivirus genome which encodes picornavirus-like RNA-dependent RNA polymerase, cysteine protease and 2C polypeptides.Virus Res. 17: 145-160.

Neill, J.D. (a). Complete nucleotide sequence of feline calicivirus strain CFI/68. Unpublished.

Neill, J.D., Reardon, I.M. and Heinrikson, R.L. (1991). Nucleotide sequence and expression of the capsid protein gene of feline calicivirus. J. Virol. 65: 5440-5447.

Oshikamo, R., Tohya, Y., Kawaguchi, Y., Tomonaga, K., Maeda, K., Takeda, N., Utagawa, E., Kai, C. and Mikami, T. (1994). The molecular cloning and sequence of an open reading frame encoding for non-structural proteins of feline calicivirus F4 strain isolated in Japan. J. Vet. Med. Sci. 56: 1093-1099.

Seal, B.S. (1994). Analysis of capsid protein gene variation among divergent isolates of feline calicivirus. Virus Res. 33: 39-53.

Seal, B.S. and Neill, J.D. (1995). Capsid protein gene sequence of feline calicivirus isolates 255 and LLK: further evidence for capsid protein configuration among feline caliciviruses. Virus Genes 9: 183-187.

Seal, B.S., Ridpath, J.F. and Mengeling, W.L. (1993). Analysis of feline calicivirus capsid protein genes: identification of variable antigenic determinant regions of the protein. J. Gen. Virol. 74: 2519-2524.

Sosnovtsev, S.V. and Green, K.Y. (1995). RNA transcripts derived from a cloned full-length copy of the feline calicivirus genome do not require VPg for infectivity. Virology 210: 383-390.

Tohya, Y., Taniguchi, Y., Takahashi, E., Utagawa, E., Takeda, N., Miyamura, K., Yamazaki, S. and Mikami, T. (1991). Sequence analysis of the 3'-end of feline calicivirus genome. Virology 183: 810-814.

Genus: Vesivirus

Species: Feline calicivirus (FCV)

References